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phenix.refine - Macromolecular Refinement
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Input files:
  Model: PHASER.1.pdb
  Data: data.mtz

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Refinement Strategy
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Strategy: Individual sites + Individual B-factors
Number of cycles: 3
Weight optimization: automatic

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Refinement Progress
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Starting R-work: 0.380
Starting R-free: 0.420

Cycle 1: R-work = 0.355, R-free = 0.385
Cycle 2: R-work = 0.338, R-free = 0.358
Cycle 3: R-work = 0.305, R-free = 0.325

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Final Statistics
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Final R-work: 0.305
Final R-free: 0.325

Resolution: 2.0 A
Number of reflections: 15234
Number of atoms: 625

Geometry:
  Bond RMSD: 0.012 A
  Angle RMSD: 1.45 degrees

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Output Files
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Refined model: model_refine_001.pdb
Map coefficients: model_refine_001.mtz

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phenix.refine completed successfully
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